Structure Modeling

Molecular Graphics

Model Building

Surface Representation

Analysis

Rendering

Image Display Programs

Libraries

Organizations / Journals

Molecular Graphics:

• Chain
• Chime
• Cn3D
• Dino
• Frodo
• Gl_render
• Insight II
• Kinemage
• MacroModel
• Main
• Midas
• MMTK
• MODELLER
• MOLMOL
• MolScript
• Bobscript
• PovScript
• RayScript
• MolPov
• MolView
• pdb2pov
• Prepi
• Pronto
• O
• RasMol
• Raster3D
• TkRaster3D
• Re_view
• Ribbons
• Scarecrow
• Setor
• Spock
• Squid
• VMD
• WHAT IF
• WebMol
• XtalView

Model Building:

• AMBER
• Chain
• Frodo
• Insight II with Xsight
• Main
• O
• Pronto
• Quanta
• XtalView

Surface Representation:

• ADS Analytically Defined Molecular Surfaces
• ASC
• Grasp / Grass
• MSMS
• MSP
• Spock
• Surfnet
• VMD

Analysis:

• Grasp
• Main
• Insight II
• Scarecrow
• Spock
• VMD
• WHAT IF
• XtalView

Rendering:

• BMRT ( Blue Moon Rendering Tools )
• POV-Ray 
• Radiance 
• Raster3D 
• Rayshade 

Image Display:

• Animate ( Image Magick )
• Convert (Image Magick )
• Display ( Image Magick ; ftp site )
• CLRpaint
• GIMP
• xv

Libraries:

• GLUT, Html
• MESA
• OpenGL
• VRML

Educational Programs:

• DS (Diffractometer Simulator), the author: Prof. I. Tanaka
• XrayView (WWW), Use
• xray-s

Organizations:

• Journal of Molecular Graphics
• SIGGRAPH

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Page Last Modified: May 5, 1999