Binding Site Analysis


Contents

Release 98.0, December 1998


1. Introduction

Hardware and installation
Invoking Binding_Site
Pilot tutorials

2. Theory

EvolutionaryTrace
Multiple sequence alignment and sequence dendrogram
Identifying trace residues
Clustering residues
ActiveSite_Search

3. Working with Binding_Site

EvolutionaryTrace
Exposed trace residues
ActiveSite_Search

4. Command Summary

EvolutionaryTrace pulldown
Sequence Dendrogram
Residue Dendrogram
ActiveSite_Search pulldown

A. References



Last updated December 06, 1998 at 11:26AM PST.
Copyright © 1998, Molecular Simulations Inc. All rights reserved.