Contents

Release 98.0, December 1998
1. Introduction
- Hardware and installation
- Invoking Binding_Site
- Pilot tutorials
2. Theory
- EvolutionaryTrace
- Multiple sequence alignment and sequence dendrogram
- Identifying trace residues
- Clustering residues
- ActiveSite_Search
3. Working with Binding_Site
- EvolutionaryTrace
- Exposed trace residues
- ActiveSite_Search
4. Command Summary
- EvolutionaryTrace pulldown
- Sequence Dendrogram
- Residue Dendrogram
- ActiveSite_Search pulldown
A. References
Last updated December 06, 1998 at 11:26AM PST.
Copyright © 1998, Molecular Simulations Inc. All rights
reserved.