[o-info] Q&A connectivity

From: Alwyn Jones (alwyn@xray.bmc.uu.se)
Date: Tue Mar 13 2007 - 02:16:33 CST


 >I am using o from PC windows. I don't know how to define the  
connectivity
file. I tried conn_file all.dat but it does not work

the connectivity is defined in the stereo_chem.odb file. for most  
residues, i provide a few variants of what bonds get drawn. you  
change which set are used with the 'connect' command, see 'A-Z of O'

Alwyn Jones
alwyn@xray.bmc.uu.se
http://xray.bmc.uu.se/alwyn



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