[o-info] MOI v11.0.1

From: Alwyn Jones (alwyn@xray.bmc.uu.se)
Date: Fri Jan 12 2007 - 11:37:21 CST


O 11.0.1
Over Christmas and New Year, I’ve updated some things that have been  
annoying me for years. This version is dated 070108, it's on the  
server and contains these changes:

A new menu.odb that includes the Render command.

New command (Render) that replaces Plot, Plot_on and Plot_off   
commands. This command creates a plot file for rendering with MolRay.  
The meta-data is generated directly from the 3D objects that are  
visible. These objects could have been transformed by O RT-operators.

Support for 10 maps in the FastMap system

Longer file name support (up to 500 characters)  in PDB_read,  
PDB_write, Fm_file, Read_format, Write_form
[N.B. these changes to the length of file names were made at the  
request of a user that used servers with very long names. I don’t  
have such systems to test against, so please let me know if there are  
still problems.]

Grab_build visibility of ‘BIT’ object corrected if this object exists  
already.

If the user has moved from the .active_centre by <ctrl>/mouse input,  
chipping to a new centre is now a smooth action.

Removed the following errors/features that I introduced in PDB_read  
in 11.0.0: no longer need the element data at the end of each ATOM  
card image, changed default of concatenation prompt if SEG IDs are  
present.

The Sequence-Slider window has been redesigned. There are now 3  
levels of detail.

Major cleanup in the Graph pull-down system. If you graph an X-axis  
with the Index (i.e. the position along the sequence), you now get a  
window into the molecule. The location of this window in the sequence  
can be changed with the Sequence-Slider.

my sun solaris amd system is now part of my work-flow. you might  
remember that about a year ago i asked who'd be interested. here's  
your chance

feedback always welcome.

Alwyn Jones
alwyn@xray.bmc.uu.se
http://xray.bmc.uu.se/alwyn



_______________________________________________
o-info mailing list (moderated)
o-info@o-info.bioxray.dk
http://o-info.bioxray.dk/mailman/listinfo/o-info



This archive was generated by hypermail 2b29 : Tue Mar 20 2007 - 03:13:39 CST