RE: [o-info] Regularize in O

From: Abhinav Kumar (akumar@plexxikon.com)
Date: Wed Feb 20 2002 - 12:49:13 CST


Thanks for all the replies regarding regularizing in O. Turns out that
refi_init and refi_gen have to be done every time the model undergoes
mutations or is read in. 
 
Was wondering if this could be in-built such that one doesn't have to do the
two steps again and again. It was not so in earlier versions of O (?) 

Abhinav
-----Original Message-----
From: Tristan Fiedler [mailto:tfiedler@newssun.med.miami.edu] 
Sent: Wednesday, February 20, 2002 9:58 AM
To: Abhinav Kumar
Cc: Oinfo (o-info@o-info.imsb.au.dk)
Subject: Re: [o-info] Regularize in O
 
The regularize commands must access the proper dictionaries for bond lengths
and angles.  Be sure to do refi_setup initially. 
Check out http://www.imsb.au.dk/~mok/o/o_man/node150.html#1195
<http://www.imsb.au.dk/~mok/o/o_man/node150.html#1195>  
Hope this helps, 
tristan 
-- 
Tristan J. Fiedler, Ph.D.
Department of Biochemistry & Molecular Biology
University of Miami Medical School
 
tfiedler@newssun.med.miami.edu
 



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