sphere command: o draws bonds according to the molecular connectivity. the connectivity is created the first time an object is made from a molecule, using the connectivity dictionary that the user has defined(usually called all.dat). if a residue type is not in the dictionary, things are drawn according to distance criteria. for the CA command, it's just a series of connected bonds. if waters are not being drawn as little stars (3 perpendicular intersecting lines)check the all.dat file that you are using. alwyn ( home page: http://xray.bmc.uu.se/alwyn/) _______________________________________________ o-info mailing list o-info@o-info.imsb.au.dk http://o-info.imsb.au.dk/mailman/listinfo/o-info
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