O: ref_zone

From: Thomas Choinowski (joe@rubi.cnrs-orleans.fr)
Date: Fri May 23 1997 - 06:58:32 CDT


JING@orion.cmc.uab.edu wrote:

Subject: 
         RE_ZO CYS, H-BONDS & SOLVENT 
     Date: 
         Wed, 21 May 1997 15:14:04 -0500 (CDT)



> 
> dear all,
> 
> I have two questions about O:
> 
> 1) Is there a way to 'refine_zone' a region containing CYS residues
>    without getting the error message like 'undefined atoms in structure'?
> 
> 2) Is it possible to draw all possible h-bonds just by clicking a single
>    nitrogen or oxygen atom?
> 
> Another general question:
> 3) Is there a program to compare the solvent structure of two independently
>    refined structures(water numbering is different) in terms of position
>    and quality?
> 
> Many thanks in advance!
> 
> Holly Jing

-- -----------------------------------------------------------
> refine_zone' a region containing CYS residues

i never got around to fixing this. o will not make the SS distance correct
(nor angles). the message can otherwise be ignored

>  h-bonds just by clicking a single  nitrogen or oxygen atom?
>

see neigbour commands, hbond commands. thats all




 
########################################################################

 CCCC N   N RRR   SSS   Centre         Thomas Choinowski                   
C     NN  N R  R S      National
C     N N N RRR   SSS   de la          Centre de Biophysique Moleculaire   
C     N  NN R R      S  Recherche      C.N.R.S                             
 CCCC N   N R  R  SSS   Scientifique   rue Charles Sadron                   

Email:  joe@rubi.cnrs-orleans.fr       45071 ORLEANS cedex 2                
Phone:  (33) 2 38 25 55 67  
Fax:    (33) 2 38 63 15 17             France                               

########################################################################



This archive was generated by hypermail 2b29 : Tue Mar 20 2007 - 03:13:21 CST