Mark Wall's method when Se-Met will not work.
Start with a COMPLETE NATIVE DATASET or you are hurting yourself.
Soak crystals in solution where they can live from few hours to few days. Include dissolved heavy atom salts (0.1 to 20 mM) in this soaking solution. If you cryo-protect your crystals for freezing, include the same concentration of heavy atom in all subsequent cryo-solutions otherwise you will 'back-soak' the metal out of your crystal.
Assay
Amt of data
Software
Acceptable criteria
1
Cell constants/isomorphism
1-2 frames
DENZO
delta a,b,c < 0.6%
2
Intensity chi2 statistics vs. native
3°
SCALEPACK
6 < chi2 < 40 at low res
3
Scaling to native Fs
10°+
SCALEIT (ccp4)
10 < Rscale < 30
4
Normal Probability Statistics
10°+
SCALEIT (ccp4)
Slope>4 Intercept>0.8
5
Difference Patterson (iso/ano)
15-30°
FFT (ccp4)/CNS
Harker peaks > 8 sigma
6
Difference Fourier (iso/ano)
15-30°
FFT (ccp4)/CNS
Atom peaks > 5 sigma
If a derivative does not pass tests 1-4, do not waste any more time collecting data, you will not find peaks in tests 5 and 6.